Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 AC092171.3-201ENST00000610122 2651 ntBASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 RPL13AP23-201ENST00000480739 586 ntBASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 AC004706.3-202ENST00000621574 984 ntBASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 AF228730.7-201ENST00000641842 219 ntBASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMARCC2Q8TAQ2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
SMARCC2Q8TAQ2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 AL356488.2-201ENST00000602755 427 ntBASIC19.89■□□□□ 0.77
SMARCC2Q8TAQ2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 PKD1P1-201ENST00000458669 6805 ntBASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 TUBB8P12-201ENST00000308911 1335 ntBASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 TUBB7P-202ENST00000428444 1305 ntBASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 TUBB8P7-204ENST00000567960 1332 ntBASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.88■□□□□ 0.77
SMARCC2Q8TAQ2 KRT18P27-201ENST00000427733 1299 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms