Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 AL671277.1-201ENST00000429656 993 ntBASIC26.31■■□□□ 1.8
VPS8Q8N3P4 GPS2P2-201ENST00000430745 888 ntBASIC26.31■■□□□ 1.8
VPS8Q8N3P4 HLA-J-202ENST00000469281 1241 ntBASIC26.31■■□□□ 1.8
VPS8Q8N3P4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 AL512652.2-201ENST00000625156 1716 ntBASIC26.31■■□□□ 1.8
VPS8Q8N3P4 AC079781.4-201ENST00000641908 219 ntBASIC26.31■■□□□ 1.8
VPS8Q8N3P4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 CD99-202ENST00000381180 530 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 LINC01225-203ENST00000563550 1244 ntBASIC26.31■■□□□ 1.8
VPS8Q8N3P4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
VPS8Q8N3P4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 AL139400.1-201ENST00000366220 510 ntBASIC26.3■■□□□ 1.8
VPS8Q8N3P4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 GATB-205ENST00000508611 605 ntTSL 2 BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC26.3■■□□□ 1.8
VPS8Q8N3P4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 FOXO1B-201ENST00000504678 1527 ntBASIC26.29■■□□□ 1.8
VPS8Q8N3P4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 METTL21AP1-201ENST00000438852 635 ntBASIC26.29■■□□□ 1.8
VPS8Q8N3P4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 SNHG9-202ENST00000564014 471 ntBASIC26.29■■□□□ 1.8
VPS8Q8N3P4 AC004835.2-201ENST00000603762 682 ntBASIC26.29■■□□□ 1.8
VPS8Q8N3P4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
VPS8Q8N3P4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC26.28■■□□□ 1.8
VPS8Q8N3P4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VPS8Q8N3P4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms