Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.46■□□□□ 0.54
VPS52Q8N1B4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 AC106028.4-201ENST00000614509 607 ntBASIC18.45■□□□□ 0.54
VPS52Q8N1B4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS52Q8N1B4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 AP000344.2-201ENST00000512987 629 ntBASIC18.44■□□□□ 0.54
VPS52Q8N1B4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VPS52Q8N1B4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS52Q8N1B4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS52Q8N1B4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms