Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 MAX-210ENST00000555419 765 ntTSL 5 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 MIR4259-201ENST00000584466 101 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 SRD5A3P1-201ENST00000603021 949 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 KRT8P12-202ENST00000472924 1397 ntBASIC23.19■■□□□ 1.3
XRN1Q8IZH2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
XRN1Q8IZH2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 SNX33P1-201ENST00000592116 1762 ntBASIC23.18■■□□□ 1.3
XRN1Q8IZH2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 AC016396.2-201ENST00000562575 1417 ntBASIC23.18■■□□□ 1.3
XRN1Q8IZH2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 AL589987.1-201ENST00000453380 819 ntBASIC23.18■■□□□ 1.3
XRN1Q8IZH2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 CD81-207ENST00000481687 890 ntTSL 2 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 AC092658.1-201ENST00000505836 891 ntBASIC23.18■■□□□ 1.3
XRN1Q8IZH2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 AC061975.2-201ENST00000581722 295 ntBASIC23.18■■□□□ 1.3
XRN1Q8IZH2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
XRN1Q8IZH2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 MIR6799-201ENST00000620297 69 ntBASIC23.17■■□□□ 1.3
XRN1Q8IZH2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 AL354751.1-201ENST00000412768 1863 ntBASIC23.17■■□□□ 1.3
XRN1Q8IZH2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 IMPDH1P4-201ENST00000445028 1534 ntBASIC23.17■■□□□ 1.3
XRN1Q8IZH2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC23.17■■□□□ 1.3
XRN1Q8IZH2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 USP32P1-208ENST00000506594 1164 ntBASIC23.16■■□□□ 1.3
XRN1Q8IZH2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 MIR4525-201ENST00000580000 75 ntBASIC23.16■■□□□ 1.3
XRN1Q8IZH2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 AC098859.1-201ENST00000502915 1238 ntBASIC23.16■■□□□ 1.3
XRN1Q8IZH2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 CTBP2P3-201ENST00000585629 1255 ntBASIC23.16■■□□□ 1.3
XRN1Q8IZH2 AC013467.2-201ENST00000605472 835 ntBASIC23.16■■□□□ 1.3
XRN1Q8IZH2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
XRN1Q8IZH2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms