Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL27A1Q8IZC6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 ATP5G2P4-201ENST00000442175 420 ntBASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 AC119751.2-201ENST00000504529 210 ntBASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 AC105021.1-202ENST00000570572 669 ntBASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL27A1Q8IZC6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 RN7SL837P-201ENST00000463010 287 ntBASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 MIR1909-201ENST00000411312 80 ntBASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 AC093724.1-201ENST00000448659 1027 ntBASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 MIR6752-201ENST00000618442 71 ntBASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 AC007431.3-201ENST00000623221 587 ntBASIC15.74■□□□□ 0.11
COL27A1Q8IZC6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms