Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
SLX4Q8IY92 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SLX4Q8IY92 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.39■□□□□ 0.86
SLX4Q8IY92 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SLX4Q8IY92 AC093004.1-201ENST00000508850 424 ntBASIC20.39■□□□□ 0.86
SLX4Q8IY92 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
SLX4Q8IY92 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLX4Q8IY92 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLX4Q8IY92 AC108860.2-201ENST00000562760 2183 ntBASIC20.39■□□□□ 0.85
SLX4Q8IY92 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLX4Q8IY92 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLX4Q8IY92 AC116353.5-201ENST00000638148 1699 ntBASIC20.39■□□□□ 0.85
SLX4Q8IY92 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.39■□□□□ 0.85
SLX4Q8IY92 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLX4Q8IY92 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLX4Q8IY92 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.39■□□□□ 0.85
SLX4Q8IY92 TTTY23B-201ENST00000442790 549 ntBASIC20.39■□□□□ 0.85
SLX4Q8IY92 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SLX4Q8IY92 RAB43P1-201ENST00000561790 589 ntBASIC20.39■□□□□ 0.85
SLX4Q8IY92 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.39■□□□□ 0.85
SLX4Q8IY92 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.39■□□□□ 0.85
SLX4Q8IY92 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLX4Q8IY92 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLX4Q8IY92 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.38■□□□□ 0.85
SLX4Q8IY92 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLX4Q8IY92 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLX4Q8IY92 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLX4Q8IY92 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLX4Q8IY92 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.38■□□□□ 0.85
SLX4Q8IY92 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLX4Q8IY92 MIR4259-201ENST00000584466 101 ntBASIC20.38■□□□□ 0.85
SLX4Q8IY92 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SLX4Q8IY92 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SLX4Q8IY92 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLX4Q8IY92 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLX4Q8IY92 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLX4Q8IY92 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.38■□□□□ 0.85
SLX4Q8IY92 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLX4Q8IY92 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 AC098850.1-201ENST00000419919 790 ntBASIC20.37■□□□□ 0.85
SLX4Q8IY92 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 AC055876.2-201ENST00000531834 546 ntBASIC20.37■□□□□ 0.85
SLX4Q8IY92 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLX4Q8IY92 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 RN7SL618P-201ENST00000477850 296 ntBASIC20.37■□□□□ 0.85
SLX4Q8IY92 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.37■□□□□ 0.85
SLX4Q8IY92 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLX4Q8IY92 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLX4Q8IY92 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLX4Q8IY92 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLX4Q8IY92 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLX4Q8IY92 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.36■□□□□ 0.85
SLX4Q8IY92 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLX4Q8IY92 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLX4Q8IY92 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.35■□□□□ 0.85
SLX4Q8IY92 AC114501.2-201ENST00000439631 535 ntBASIC20.35■□□□□ 0.85
SLX4Q8IY92 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.35■□□□□ 0.85
SLX4Q8IY92 RN7SL752P-201ENST00000463779 287 ntBASIC20.35■□□□□ 0.85
SLX4Q8IY92 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.35■□□□□ 0.85
SLX4Q8IY92 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.35■□□□□ 0.85
SLX4Q8IY92 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms