Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 PGAM5P1-201ENST00000518923 814 ntBASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM48Q8IWZ4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM48Q8IWZ4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM48Q8IWZ4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 AC023274.1-201ENST00000418278 595 ntBASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 AC016396.2-201ENST00000562575 1417 ntBASIC16.7■□□□□ 0.26
TRIM48Q8IWZ4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 AL138688.1-201ENST00000624851 1594 ntBASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 MIR1233-2-201ENST00000408138 82 ntBASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 MIR1233-1-201ENST00000408722 82 ntBASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 HCG4B-203ENST00000450128 991 ntBASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 GPALPP1-207ENST00000611650 899 ntBASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM48Q8IWZ4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 DNAJB3-201ENST00000446806 729 ntBASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 AC018845.2-201ENST00000568326 409 ntBASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 MIR3687-2-201ENST00000577708 61 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms