Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 AP002414.1-201ENST00000391405 1147 ntBASIC15.73■□□□□ 0.11
VRK2Q86Y07 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 PRYP5-201ENST00000451909 266 ntBASIC15.73■□□□□ 0.11
VRK2Q86Y07 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 MTDHP3-201ENST00000594186 672 ntBASIC15.73■□□□□ 0.11
VRK2Q86Y07 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 AL022326.1-202ENST00000641533 845 ntBASIC15.73■□□□□ 0.11
VRK2Q86Y07 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
VRK2Q86Y07 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 AC243591.1-201ENST00000452967 1364 ntBASIC15.73■□□□□ 0.11
VRK2Q86Y07 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.73■□□□□ 0.11
VRK2Q86Y07 AL356309.3-201ENST00000624132 1934 ntBASIC15.72■□□□□ 0.11
VRK2Q86Y07 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 KRT18P31-201ENST00000506277 1292 ntBASIC15.72■□□□□ 0.11
VRK2Q86Y07 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VRK2Q86Y07 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VRK2Q86Y07 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 HLA-A-202ENST00000376806 1854 ntBASIC15.71■□□□□ 0.11
VRK2Q86Y07 AL391256.1-201ENST00000443260 1855 ntBASIC15.71■□□□□ 0.11
VRK2Q86Y07 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 AC018695.7-201ENST00000624587 2492 ntBASIC15.71■□□□□ 0.11
VRK2Q86Y07 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 NCF1C-201ENST00000438382 1427 ntBASIC15.71■□□□□ 0.11
VRK2Q86Y07 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 RBM17P3-201ENST00000417687 1192 ntBASIC15.71■□□□□ 0.11
VRK2Q86Y07 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 AL121772.3-201ENST00000610840 674 ntBASIC15.71■□□□□ 0.11
VRK2Q86Y07 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VRK2Q86Y07 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
VRK2Q86Y07 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
VRK2Q86Y07 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms