Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 AC008735.3-201ENST00000596646 500 ntBASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 AL512638.1-201ENST00000457493 794 ntBASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 ELK1P1-201ENST00000485699 580 ntBASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 PARP8-206ENST00000503665 572 ntTSL 4 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 IGHV3-62-201ENST00000520057 340 ntBASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 LINC01451-201ENST00000623792 534 ntBASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
VPS13BQ7Z7G8 AC134043.2-201ENST00000624206 2238 ntBASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AC067852.2-201ENST00000590513 2313 ntBASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AC098614.1-201ENST00000368528 745 ntBASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 MIR4515-201ENST00000584082 81 ntBASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AC092053.1-201ENST00000605787 1936 ntBASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AL391825.1-201ENST00000457671 1364 ntBASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AC018529.1-201ENST00000613063 361 ntBASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 NOC2LP1-202ENST00000452600 2235 ntBASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC10.34□□□□□ -0.75
VPS13BQ7Z7G8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VPS13BQ7Z7G8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms