Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 MIR3180-1-201ENST00000580374 94 ntBASIC15.75■□□□□ 0.11
TUBA1AQ71U36 AC090616.6-201ENST00000582640 721 ntBASIC15.75■□□□□ 0.11
TUBA1AQ71U36 MIR3180-3-201ENST00000584616 94 ntBASIC15.75■□□□□ 0.11
TUBA1AQ71U36 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 AC116407.2-201ENST00000613639 860 ntBASIC15.75■□□□□ 0.11
TUBA1AQ71U36 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBA1AQ71U36 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 REXO1L11P-201ENST00000620964 1927 ntBASIC15.74■□□□□ 0.11
TUBA1AQ71U36 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 ATP5G2P1-201ENST00000433580 426 ntBASIC15.74■□□□□ 0.11
TUBA1AQ71U36 TOB2P1-201ENST00000469761 992 ntBASIC15.74■□□□□ 0.11
TUBA1AQ71U36 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 AC091607.1-201ENST00000490318 1060 ntBASIC15.74■□□□□ 0.11
TUBA1AQ71U36 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 AP000867.3-201ENST00000524675 377 ntBASIC15.74■□□□□ 0.11
TUBA1AQ71U36 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TUBA1AQ71U36 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 TSPY26P-202ENST00000565928 3884 ntBASIC15.73■□□□□ 0.11
TUBA1AQ71U36 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.73■□□□□ 0.11
TUBA1AQ71U36 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms