Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHC4Q6S5L8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 SNX33P1-201ENST00000592116 1762 ntBASIC19.15■□□□□ 0.66
SHC4Q6S5L8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 AC091304.2-201ENST00000564639 760 ntBASIC19.15■□□□□ 0.66
SHC4Q6S5L8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 AC025062.2-201ENST00000605477 670 ntBASIC19.15■□□□□ 0.66
SHC4Q6S5L8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHC4Q6S5L8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHC4Q6S5L8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.14■□□□□ 0.66
SHC4Q6S5L8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHC4Q6S5L8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
SHC4Q6S5L8 AC005052.1-201ENST00000625181 2492 ntBASIC19.14■□□□□ 0.66
SHC4Q6S5L8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 OR6D1P-202ENST00000641007 5290 ntBASIC19.14■□□□□ 0.65
SHC4Q6S5L8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 AF238378.1-201ENST00000526806 358 ntBASIC19.14■□□□□ 0.65
SHC4Q6S5L8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.14■□□□□ 0.65
SHC4Q6S5L8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 AC012313.10-201ENST00000623509 926 ntBASIC19.14■□□□□ 0.65
SHC4Q6S5L8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHC4Q6S5L8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 AC026691.1-201ENST00000602502 2017 ntBASIC19.13■□□□□ 0.65
SHC4Q6S5L8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 AL391005.1-201ENST00000623953 2435 ntBASIC19.13■□□□□ 0.65
SHC4Q6S5L8 CYP2T1P-202ENST00000641596 2535 ntBASIC19.13■□□□□ 0.65
SHC4Q6S5L8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 PTCHD3P3-201ENST00000403073 906 ntBASIC19.13■□□□□ 0.65
SHC4Q6S5L8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 HLA-J-202ENST00000469281 1241 ntBASIC19.13■□□□□ 0.65
SHC4Q6S5L8 AC139887.3-201ENST00000568585 713 ntBASIC19.13■□□□□ 0.65
SHC4Q6S5L8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC4Q6S5L8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms