Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNKSR3Q6P9H4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 FAM220BP-201ENST00000377689 816 ntBASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 AL132655.2-201ENST00000596276 594 ntBASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNKSR3Q6P9H4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 FRMD8P1-201ENST00000440433 1524 ntBASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 HLA-V-201ENST00000429037 534 ntBASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 MTND6P24-201ENST00000440466 518 ntBASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 ATP5G2P4-201ENST00000442175 420 ntBASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 AL589739.1-201ENST00000607720 493 ntBASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 AL844908.2-201ENST00000609461 460 ntBASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNKSR3Q6P9H4 AC004408.2-201ENST00000623613 2777 ntBASIC18.08■□□□□ 0.49
CNKSR3Q6P9H4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNKSR3Q6P9H4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNKSR3Q6P9H4 AC007541.1-201ENST00000570282 1469 ntBASIC18.08■□□□□ 0.49
CNKSR3Q6P9H4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CNKSR3Q6P9H4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
CNKSR3Q6P9H4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 AL353779.1-201ENST00000434793 351 ntBASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 AC140912.1-201ENST00000577171 1054 ntBASIC18.08■□□□□ 0.48
CNKSR3Q6P9H4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms