Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 AC093525.9-201ENST00000624961 1746 ntBASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 SLC22A20-204ENST00000530038 1673 ntBASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 AC092474.2-201ENST00000424288 719 ntBASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 AL592309.1-201ENST00000443127 649 ntBASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 AL135744.1-201ENST00000565098 629 ntBASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 AC116353.5-201ENST00000638148 1699 ntBASIC19.05■□□□□ 0.64
CCDC62Q6P9F0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 FAM58DP-201ENST00000428076 619 ntBASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 RN7SL589P-201ENST00000481268 310 ntBASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 AC109635.5-201ENST00000533593 962 ntBASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 LINC01225-203ENST00000563550 1244 ntBASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 TOP3BP1-201ENST00000420768 1380 ntBASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC62Q6P9F0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 AC069335.1-201ENST00000489972 472 ntBASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 MIR3197-201ENST00000582241 73 ntBASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 AC015911.4-201ENST00000588022 1070 ntBASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 AC093512.1-201ENST00000617969 520 ntBASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 AL161645.1-201ENST00000622716 1255 ntBASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms