Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC27.32■■□□□ 1.96
SNAPC4Q5SXM2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNAPC4Q5SXM2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 AC015936.2-201ENST00000593177 259 ntBASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC27.3■■□□□ 1.96
SNAPC4Q5SXM2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 KRT8P49-201ENST00000604166 1432 ntBASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 AC020907.1-201ENST00000616460 1350 ntBASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 SERBP1P3-201ENST00000459980 809 ntBASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNAPC4Q5SXM2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 AC009113.1-201ENST00000570267 2443 ntBASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SNAPC4Q5SXM2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC27.27■■□□□ 1.96
SNAPC4Q5SXM2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
SNAPC4Q5SXM2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SNAPC4Q5SXM2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC27.26■■□□□ 1.95
SNAPC4Q5SXM2 AL355994.2-201ENST00000447882 704 ntBASIC27.26■■□□□ 1.95
SNAPC4Q5SXM2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
SNAPC4Q5SXM2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC27.26■■□□□ 1.95
SNAPC4Q5SXM2 AL583810.1-201ENST00000553344 1045 ntBASIC27.26■■□□□ 1.95
SNAPC4Q5SXM2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC27.26■■□□□ 1.95
SNAPC4Q5SXM2 NOC2LP1-202ENST00000452600 2235 ntBASIC27.26■■□□□ 1.95
SNAPC4Q5SXM2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms