Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AKAP8P1-201ENST00000434743 1349 ntBASIC17.94■□□□□ 0.46
VARS2Q5ST30 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
VARS2Q5ST30 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VARS2Q5ST30 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VARS2Q5ST30 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
VARS2Q5ST30 AL021920.2-201ENST00000624828 1351 ntBASIC17.93■□□□□ 0.46
VARS2Q5ST30 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.93■□□□□ 0.46
VARS2Q5ST30 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VARS2Q5ST30 KRT8P49-201ENST00000604166 1432 ntBASIC17.93■□□□□ 0.46
VARS2Q5ST30 AC092474.2-201ENST00000424288 719 ntBASIC17.93■□□□□ 0.46
VARS2Q5ST30 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.93■□□□□ 0.46
VARS2Q5ST30 AC005237.2-201ENST00000434368 219 ntBASIC17.93■□□□□ 0.46
VARS2Q5ST30 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 AL592309.1-201ENST00000443127 649 ntBASIC17.93■□□□□ 0.46
VARS2Q5ST30 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.93■□□□□ 0.46
VARS2Q5ST30 AC109322.1-201ENST00000524499 1264 ntBASIC17.93■□□□□ 0.46
VARS2Q5ST30 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.93■□□□□ 0.46
VARS2Q5ST30 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 LINC00628-201ENST00000628516 1289 ntBASIC17.93■□□□□ 0.46
VARS2Q5ST30 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.93■□□□□ 0.46
VARS2Q5ST30 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
VARS2Q5ST30 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VARS2Q5ST30 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 AC131009.4-201ENST00000624048 1740 ntBASIC17.92■□□□□ 0.46
VARS2Q5ST30 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 RNU1-129P-201ENST00000384064 167 ntBASIC17.92■□□□□ 0.46
VARS2Q5ST30 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 U1.21-201ENST00000580816 167 ntBASIC17.92■□□□□ 0.46
VARS2Q5ST30 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 AL031055.1-201ENST00000606362 631 ntBASIC17.92■□□□□ 0.46
VARS2Q5ST30 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 AC009093.7-201ENST00000623853 1223 ntBASIC17.92■□□□□ 0.46
VARS2Q5ST30 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 LINC02012-201ENST00000608206 1725 ntBASIC17.92■□□□□ 0.46
VARS2Q5ST30 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.92■□□□□ 0.46
VARS2Q5ST30 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VARS2Q5ST30 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 KATNBL1P2-201ENST00000433311 835 ntBASIC17.91■□□□□ 0.46
VARS2Q5ST30 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms