Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBWD3Q5JTY5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBWD3Q5JTY5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.35■□□□□ 0.53
CBWD3Q5JTY5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CBWD3Q5JTY5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CBWD3Q5JTY5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CBWD3Q5JTY5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.35■□□□□ 0.53
CBWD3Q5JTY5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 LINC00895-201ENST00000629028 1637 ntBASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 AL118508.1-201ENST00000613502 2345 ntBASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 TOP3BP1-201ENST00000420768 1380 ntBASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 AC009078.2-202ENST00000463353 338 ntBASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 IGHV3-65-201ENST00000523210 341 ntBASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 SLC25A6P4-201ENST00000586535 553 ntBASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 AC008667.4-201ENST00000607370 168 ntBASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 AL773604.1-201ENST00000617417 272 ntBASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 HLA-A-202ENST00000376806 1854 ntBASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.34■□□□□ 0.53
CBWD3Q5JTY5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBWD3Q5JTY5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.33■□□□□ 0.53
CBWD3Q5JTY5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CBWD3Q5JTY5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CBWD3Q5JTY5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBWD3Q5JTY5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CBWD3Q5JTY5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CBWD3Q5JTY5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.33■□□□□ 0.53
CBWD3Q5JTY5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 AL031284.1-201ENST00000419297 478 ntBASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 AC107918.2-201ENST00000530817 355 ntBASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 AC117500.6-201ENST00000624871 588 ntBASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CBWD3Q5JTY5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CBWD3Q5JTY5 MIR1199-201ENST00000621445 119 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms