Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 AC092597.1-201ENST00000487352 616 ntBASIC14.15□□□□□ -0.14
SP6Q3SY56 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.15□□□□□ -0.14
SP6Q3SY56 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.15□□□□□ -0.14
SP6Q3SY56 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.15□□□□□ -0.14
SP6Q3SY56 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.15□□□□□ -0.14
SP6Q3SY56 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 AL138966.2-201ENST00000621997 464 ntBASIC14.15□□□□□ -0.14
SP6Q3SY56 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.15□□□□□ -0.14
SP6Q3SY56 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SP6Q3SY56 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.15□□□□□ -0.14
SP6Q3SY56 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.15□□□□□ -0.14
SP6Q3SY56 AL645728.1-201ENST00000366221 2101 ntBASIC14.15□□□□□ -0.14
SP6Q3SY56 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.15□□□□□ -0.14
SP6Q3SY56 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SP6Q3SY56 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SP6Q3SY56 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.15□□□□□ -0.14
SP6Q3SY56 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.15□□□□□ -0.14
SP6Q3SY56 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SP6Q3SY56 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.14□□□□□ -0.15
SP6Q3SY56 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.14□□□□□ -0.15
SP6Q3SY56 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.14□□□□□ -0.15
SP6Q3SY56 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SP6Q3SY56 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.14□□□□□ -0.15
SP6Q3SY56 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.14□□□□□ -0.15
SP6Q3SY56 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SP6Q3SY56 AC007967.3-201ENST00000434308 558 ntBASIC14.14□□□□□ -0.15
SP6Q3SY56 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.14□□□□□ -0.15
SP6Q3SY56 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.14□□□□□ -0.15
SP6Q3SY56 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.14□□□□□ -0.15
SP6Q3SY56 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.14□□□□□ -0.15
SP6Q3SY56 GPR32P1-201ENST00000601788 811 ntBASIC14.14□□□□□ -0.15
SP6Q3SY56 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.14□□□□□ -0.15
SP6Q3SY56 AC024909.3-201ENST00000611513 2257 ntBASIC14.14□□□□□ -0.15
SP6Q3SY56 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.14□□□□□ -0.15
SP6Q3SY56 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
SP6Q3SY56 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.14□□□□□ -0.15
SP6Q3SY56 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.14□□□□□ -0.15
SP6Q3SY56 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SP6Q3SY56 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SP6Q3SY56 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 AC103702.1-201ENST00000548801 2630 ntBASIC14.13□□□□□ -0.15
SP6Q3SY56 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.13□□□□□ -0.15
SP6Q3SY56 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.13□□□□□ -0.15
SP6Q3SY56 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
SP6Q3SY56 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.13□□□□□ -0.15
SP6Q3SY56 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.13□□□□□ -0.15
SP6Q3SY56 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.13□□□□□ -0.15
SP6Q3SY56 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SP6Q3SY56 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SP6Q3SY56 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SP6Q3SY56 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.13□□□□□ -0.15
SP6Q3SY56 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.13□□□□□ -0.15
SP6Q3SY56 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.13□□□□□ -0.15
SP6Q3SY56 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SP6Q3SY56 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SP6Q3SY56 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.13□□□□□ -0.15
SP6Q3SY56 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms