Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM71Q2Q1W2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AC063926.2-201ENST00000623766 1308 ntBASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AC090340.1-201ENST00000620778 4980 ntBASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRIM71Q2Q1W2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.54
TRIM71Q2Q1W2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.39■□□□□ 0.54
TRIM71Q2Q1W2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM71Q2Q1W2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 AC008764.6-201ENST00000595909 2069 ntBASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 AC241585.1-201ENST00000433527 519 ntBASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 AL512638.1-201ENST00000457493 794 ntBASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 FOXO1B-201ENST00000504678 1527 ntBASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM71Q2Q1W2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 AP3S2-216ENST00000617003 1561 ntBASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 SERBP1P5-201ENST00000510079 1181 ntBASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 AP005018.1-201ENST00000525475 301 ntBASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 RARRES2P9-201ENST00000565168 469 ntBASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 AC021097.1-201ENST00000607902 574 ntBASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 AL590560.3-201ENST00000623350 461 ntBASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 AC073592.8-201ENST00000624126 511 ntBASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRIM71Q2Q1W2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms