Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 MTND6P24-201ENST00000440466 518 ntBASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 GOLGA2P4-201ENST00000441462 777 ntBASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 CROCCP4-201ENST00000457096 498 ntBASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 AC099548.2-209ENST00000480264 625 ntBASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 BTBD7P1-201ENST00000447253 1453 ntBASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO4Q2I0M5 ANO7L1-203ENST00000602586 1720 ntBASIC16.33■□□□□ 0.21
RSPO4Q2I0M5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RSPO4Q2I0M5 AL138781.2-201ENST00000617896 1843 ntBASIC16.33■□□□□ 0.21
RSPO4Q2I0M5 AC009949.1-201ENST00000623048 1830 ntBASIC16.33■□□□□ 0.21
RSPO4Q2I0M5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RSPO4Q2I0M5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.33■□□□□ 0.21
RSPO4Q2I0M5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RSPO4Q2I0M5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.33■□□□□ 0.21
RSPO4Q2I0M5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RSPO4Q2I0M5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 ANKRD19P-201ENST00000338192 862 ntBASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 BOLA2P3-201ENST00000404566 256 ntBASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 AL583810.1-201ENST00000553344 1045 ntBASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 AC008735.3-201ENST00000596646 500 ntBASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 MIR6727-201ENST00000620702 65 ntBASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 AC126763.1-201ENST00000552015 2118 ntBASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO4Q2I0M5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 SLC7A15P-201ENST00000424028 1363 ntBASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 AC142381.1-201ENST00000426099 345 ntBASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 AC007389.4-201ENST00000454674 793 ntBASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms