Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH17Q12864 KRT8P49-201ENST00000604166 1432 ntBASIC17.18■□□□□ 0.34
CDH17Q12864 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH17Q12864 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CDH17Q12864 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH17Q12864 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH17Q12864 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH17Q12864 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CDH17Q12864 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDH17Q12864 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH17Q12864 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH17Q12864 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH17Q12864 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH17Q12864 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 AL391256.1-201ENST00000443260 1855 ntBASIC17.17■□□□□ 0.34
CDH17Q12864 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH17Q12864 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH17Q12864 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH17Q12864 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH17Q12864 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.17■□□□□ 0.34
CDH17Q12864 IFNL4P1-201ENST00000607083 540 ntBASIC17.17■□□□□ 0.34
CDH17Q12864 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 AC012313.10-201ENST00000623509 926 ntBASIC17.17■□□□□ 0.34
CDH17Q12864 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.17■□□□□ 0.34
CDH17Q12864 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CDH17Q12864 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH17Q12864 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CDH17Q12864 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH17Q12864 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH17Q12864 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH17Q12864 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDH17Q12864 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDH17Q12864 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH17Q12864 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.16■□□□□ 0.34
CDH17Q12864 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH17Q12864 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDH17Q12864 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDH17Q12864 KRT18P56-201ENST00000507275 550 ntBASIC17.16■□□□□ 0.34
CDH17Q12864 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH17Q12864 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH17Q12864 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 AC025062.2-201ENST00000605477 670 ntBASIC17.16■□□□□ 0.34
CDH17Q12864 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDH17Q12864 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 LINC00895-201ENST00000629028 1637 ntBASIC17.16■□□□□ 0.34
CDH17Q12864 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDH17Q12864 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH17Q12864 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CDH17Q12864 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH17Q12864 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
CDH17Q12864 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH17Q12864 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH17Q12864 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CDH17Q12864 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH17Q12864 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH17Q12864 PAWRP1-201ENST00000451083 565 ntBASIC17.15■□□□□ 0.34
CDH17Q12864 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDH17Q12864 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH17Q12864 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 AC021087.4-201ENST00000563761 564 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms