Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 KRT18P27-201ENST00000427733 1299 ntBASIC14.86□□□□□ -0.03
HIST1H3AP68431 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 DUSP5P1-201ENST00000441325 1139 ntBASIC14.86□□□□□ -0.03
HIST1H3AP68431 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 AC006557.2-201ENST00000592985 1240 ntBASIC14.86□□□□□ -0.03
HIST1H3AP68431 AC013467.2-201ENST00000605472 835 ntBASIC14.86□□□□□ -0.03
HIST1H3AP68431 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.86□□□□□ -0.03
HIST1H3AP68431 AL805961.1-202ENST00000641562 540 ntBASIC14.86□□□□□ -0.03
HIST1H3AP68431 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H3AP68431 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H3AP68431 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 AC073621.1-201ENST00000392730 636 ntBASIC14.85□□□□□ -0.03
HIST1H3AP68431 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.85□□□□□ -0.03
HIST1H3AP68431 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 AC006504.4-201ENST00000592118 1568 ntBASIC14.85□□□□□ -0.03
HIST1H3AP68431 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H3AP68431 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H3AP68431 TOP3BP1-201ENST00000420768 1380 ntBASIC14.85□□□□□ -0.03
HIST1H3AP68431 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 AC011270.2-201ENST00000624293 2550 ntBASIC14.84□□□□□ -0.03
HIST1H3AP68431 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIST1H3AP68431 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIST1H3AP68431 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms