Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 IGHGP-201ENST00000390555 1178 ntBASIC15.53■□□□□ 0.08
CXCR4P61073 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CXCR4P61073 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.53■□□□□ 0.08
CXCR4P61073 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.53■□□□□ 0.08
CXCR4P61073 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 MTCL1P1-201ENST00000446207 792 ntBASIC15.53■□□□□ 0.08
CXCR4P61073 ATP5G1P1-201ENST00000448724 379 ntBASIC15.53■□□□□ 0.08
CXCR4P61073 COX11P1-201ENST00000489116 835 ntBASIC15.53■□□□□ 0.08
CXCR4P61073 AP003733.1-201ENST00000491725 852 ntBASIC15.53■□□□□ 0.08
CXCR4P61073 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.53■□□□□ 0.08
CXCR4P61073 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CXCR4P61073 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CXCR4P61073 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CXCR4P61073 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CXCR4P61073 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.52■□□□□ 0.08
CXCR4P61073 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.52■□□□□ 0.08
CXCR4P61073 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CXCR4P61073 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CXCR4P61073 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CXCR4P61073 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CXCR4P61073 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.52■□□□□ 0.08
CXCR4P61073 AL353692.3-201ENST00000407031 1396 ntBASIC15.52■□□□□ 0.08
CXCR4P61073 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CXCR4P61073 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CXCR4P61073 AL603832.2-201ENST00000566195 2125 ntBASIC15.52■□□□□ 0.08
CXCR4P61073 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CXCR4P61073 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.52■□□□□ 0.08
CXCR4P61073 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.52■□□□□ 0.08
CXCR4P61073 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.52■□□□□ 0.08
CXCR4P61073 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.52■□□□□ 0.08
CXCR4P61073 STARP1-201ENST00000397973 869 ntBASIC15.52■□□□□ 0.08
CXCR4P61073 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.52■□□□□ 0.08
CXCR4P61073 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.52■□□□□ 0.08
CXCR4P61073 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CXCR4P61073 ZNF444P1-201ENST00000559497 298 ntBASIC15.52■□□□□ 0.08
CXCR4P61073 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.52■□□□□ 0.08
CXCR4P61073 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.52■□□□□ 0.08
CXCR4P61073 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CXCR4P61073 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.52■□□□□ 0.07
CXCR4P61073 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCR4P61073 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCR4P61073 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CXCR4P61073 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.52■□□□□ 0.07
CXCR4P61073 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCR4P61073 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCR4P61073 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CXCR4P61073 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCR4P61073 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CXCR4P61073 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.52■□□□□ 0.07
CXCR4P61073 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CXCR4P61073 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CXCR4P61073 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
CXCR4P61073 AC068418.2-201ENST00000577309 3703 ntBASIC15.52■□□□□ 0.07
CXCR4P61073 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CXCR4P61073 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCR4P61073 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CXCR4P61073 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CXCR4P61073 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.51■□□□□ 0.07
CXCR4P61073 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CXCR4P61073 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.51■□□□□ 0.07
CXCR4P61073 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.51■□□□□ 0.07
CXCR4P61073 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCR4P61073 AC068472.1-201ENST00000474589 881 ntBASIC15.51■□□□□ 0.07
CXCR4P61073 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.51■□□□□ 0.07
CXCR4P61073 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CXCR4P61073 AC010203.1-204ENST00000548782 407 ntBASIC15.51■□□□□ 0.07
CXCR4P61073 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms