Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.77■□□□□ 0.27
SRP54P61011 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SRP54P61011 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRP54P61011 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SRP54P61011 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRP54P61011 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
SRP54P61011 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRP54P61011 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SRP54P61011 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.76■□□□□ 0.27
SRP54P61011 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.76■□□□□ 0.27
SRP54P61011 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.76■□□□□ 0.27
SRP54P61011 AC254562.1-201ENST00000417586 456 ntBASIC16.76■□□□□ 0.27
SRP54P61011 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.76■□□□□ 0.27
SRP54P61011 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 AC107918.2-201ENST00000530817 355 ntBASIC16.76■□□□□ 0.27
SRP54P61011 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 AL031432.2-201ENST00000566714 459 ntBASIC16.76■□□□□ 0.27
SRP54P61011 AL928711.1-201ENST00000570165 459 ntBASIC16.76■□□□□ 0.27
SRP54P61011 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 AC091812.2-201ENST00000619081 385 ntBASIC16.76■□□□□ 0.27
SRP54P61011 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.76■□□□□ 0.27
SRP54P61011 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.76■□□□□ 0.27
SRP54P61011 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SRP54P61011 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SRP54P61011 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP54P61011 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.75■□□□□ 0.27
SRP54P61011 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.75■□□□□ 0.27
SRP54P61011 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SRP54P61011 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SRP54P61011 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.75■□□□□ 0.27
SRP54P61011 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.75■□□□□ 0.27
SRP54P61011 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SRP54P61011 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.75■□□□□ 0.27
SRP54P61011 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.75■□□□□ 0.27
SRP54P61011 ACTG1P14-201ENST00000446382 1122 ntBASIC16.75■□□□□ 0.27
SRP54P61011 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.75■□□□□ 0.27
SRP54P61011 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.75■□□□□ 0.27
SRP54P61011 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.75■□□□□ 0.27
SRP54P61011 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 AL138688.1-201ENST00000624851 1594 ntBASIC16.75■□□□□ 0.27
SRP54P61011 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.75■□□□□ 0.27
SRP54P61011 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SRP54P61011 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SRP54P61011 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SRP54P61011 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SRP54P61011 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SRP54P61011 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SRP54P61011 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.74■□□□□ 0.27
SRP54P61011 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.74■□□□□ 0.27
SRP54P61011 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SRP54P61011 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 EGFEM1P-202ENST00000431685 1563 ntBASIC16.74■□□□□ 0.27
SRP54P61011 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SRP54P61011 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms