Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
CLDN8P56748 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLDN8P56748 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN8P56748 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN8P56748 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 AC243591.1-201ENST00000452967 1364 ntBASIC16.17■□□□□ 0.18
CLDN8P56748 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN8P56748 NUS1P2-201ENST00000417358 873 ntBASIC16.17■□□□□ 0.18
CLDN8P56748 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.17■□□□□ 0.18
CLDN8P56748 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN8P56748 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
CLDN8P56748 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN8P56748 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN8P56748 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN8P56748 TERC-201ENST00000602385 541 ntBASIC16.17■□□□□ 0.18
CLDN8P56748 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN8P56748 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
CLDN8P56748 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN8P56748 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN8P56748 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN8P56748 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN8P56748 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN8P56748 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLDN8P56748 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN8P56748 AL391005.1-201ENST00000623953 2435 ntBASIC16.17■□□□□ 0.18
CLDN8P56748 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CLDN8P56748 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 AL662844.4-201ENST00000606367 2838 ntBASIC16.17■□□□□ 0.18
CLDN8P56748 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN8P56748 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN8P56748 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN8P56748 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN8P56748 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN8P56748 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CLDN8P56748 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CLDN8P56748 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN8P56748 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN8P56748 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 KRT16P4-201ENST00000453883 522 ntBASIC16.16■□□□□ 0.18
CLDN8P56748 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN8P56748 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.16■□□□□ 0.18
CLDN8P56748 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.16■□□□□ 0.18
CLDN8P56748 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN8P56748 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLDN8P56748 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN8P56748 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN8P56748 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN8P56748 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.16■□□□□ 0.18
CLDN8P56748 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN8P56748 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN8P56748 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLDN8P56748 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLDN8P56748 AC079328.2-201ENST00000561241 3354 ntBASIC16.15■□□□□ 0.18
CLDN8P56748 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN8P56748 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN8P56748 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN8P56748 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN8P56748 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN8P56748 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLDN8P56748 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN8P56748 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN8P56748 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLDN8P56748 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN8P56748 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN8P56748 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLDN8P56748 AC013467.2-201ENST00000605472 835 ntBASIC16.15■□□□□ 0.18
CLDN8P56748 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN8P56748 AL358472.4-201ENST00000633140 710 ntBASIC16.15■□□□□ 0.18
CLDN8P56748 AL139011.1-202ENST00000642063 584 ntBASIC16.15■□□□□ 0.18
CLDN8P56748 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN8P56748 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN8P56748 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN8P56748 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms