Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CDKN2DP55273 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.78■□□□□ 0.28
CDKN2DP55273 LINC00895-201ENST00000629028 1637 ntBASIC16.78■□□□□ 0.28
CDKN2DP55273 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.78■□□□□ 0.28
CDKN2DP55273 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.78■□□□□ 0.28
CDKN2DP55273 PAWRP1-201ENST00000451083 565 ntBASIC16.78■□□□□ 0.28
CDKN2DP55273 SCARNA2-201ENST00000458748 420 ntBASIC16.78■□□□□ 0.28
CDKN2DP55273 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.78■□□□□ 0.28
CDKN2DP55273 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.78■□□□□ 0.28
CDKN2DP55273 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.78■□□□□ 0.28
CDKN2DP55273 IFNL4P1-201ENST00000607083 540 ntBASIC16.78■□□□□ 0.28
CDKN2DP55273 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDKN2DP55273 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDKN2DP55273 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.78■□□□□ 0.28
CDKN2DP55273 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.78■□□□□ 0.28
CDKN2DP55273 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDKN2DP55273 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CDKN2DP55273 AL662844.4-201ENST00000606367 2838 ntBASIC16.78■□□□□ 0.28
CDKN2DP55273 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKN2DP55273 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
CDKN2DP55273 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CDKN2DP55273 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CDKN2DP55273 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDKN2DP55273 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDKN2DP55273 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDKN2DP55273 AC006504.4-201ENST00000592118 1568 ntBASIC16.77■□□□□ 0.28
CDKN2DP55273 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CDKN2DP55273 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.77■□□□□ 0.28
CDKN2DP55273 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CDKN2DP55273 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDKN2DP55273 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.77■□□□□ 0.28
CDKN2DP55273 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.77■□□□□ 0.28
CDKN2DP55273 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKN2DP55273 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDKN2DP55273 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKN2DP55273 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDKN2DP55273 PTCHD3P3-201ENST00000403073 906 ntBASIC16.77■□□□□ 0.28
CDKN2DP55273 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.77■□□□□ 0.28
CDKN2DP55273 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDKN2DP55273 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKN2DP55273 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKN2DP55273 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.77■□□□□ 0.27
CDKN2DP55273 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKN2DP55273 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKN2DP55273 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKN2DP55273 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CDKN2DP55273 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CDKN2DP55273 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKN2DP55273 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CDKN2DP55273 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDKN2DP55273 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDKN2DP55273 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CDKN2DP55273 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 AC018695.7-201ENST00000624587 2492 ntBASIC16.76■□□□□ 0.27
CDKN2DP55273 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.76■□□□□ 0.27
CDKN2DP55273 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.76■□□□□ 0.27
CDKN2DP55273 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.76■□□□□ 0.27
CDKN2DP55273 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDKN2DP55273 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 ELK2BP-201ENST00000415014 1224 ntBASIC16.76■□□□□ 0.27
CDKN2DP55273 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.76■□□□□ 0.27
CDKN2DP55273 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.76■□□□□ 0.27
CDKN2DP55273 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDKN2DP55273 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.76■□□□□ 0.27
CDKN2DP55273 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 KRT18P56-201ENST00000507275 550 ntBASIC16.76■□□□□ 0.27
CDKN2DP55273 LINC01711-201ENST00000598340 967 ntBASIC16.76■□□□□ 0.27
CDKN2DP55273 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.76■□□□□ 0.27
CDKN2DP55273 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDKN2DP55273 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDKN2DP55273 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms