Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC25A1P53007 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
SLC25A1P53007 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC25A1P53007 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
SLC25A1P53007 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC25A1P53007 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 AC006277.1-201ENST00000624348 1610 ntBASIC15.1■□□□□ 0.01
SLC25A1P53007 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 AP005117.1-201ENST00000584346 1413 ntBASIC15.1■□□□□ 0.01
SLC25A1P53007 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC25A1P53007 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC25A1P53007 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC25A1P53007 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC25A1P53007 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC25A1P53007 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC25A1P53007 NUS1P2-201ENST00000417358 873 ntBASIC15.1■□□□□ 0.01
SLC25A1P53007 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC25A1P53007 ATP5G2P1-201ENST00000433580 426 ntBASIC15.1■□□□□ 0.01
SLC25A1P53007 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.1■□□□□ 0.01
SLC25A1P53007 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SLC25A1P53007 KRT16P4-201ENST00000453883 522 ntBASIC15.1■□□□□ 0.01
SLC25A1P53007 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC25A1P53007 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC25A1P53007 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.1■□□□□ 0.01
SLC25A1P53007 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SLC25A1P53007 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC25A1P53007 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC25A1P53007 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC25A1P53007 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC25A1P53007 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SLC25A1P53007 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 CROCCP1-201ENST00000426910 5675 ntBASIC15.09■□□□□ 0.01
SLC25A1P53007 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SLC25A1P53007 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.09■□□□□ 0.01
SLC25A1P53007 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC25A1P53007 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 AL139384.1-201ENST00000612143 3047 ntBASIC15.09■□□□□ 0.01
SLC25A1P53007 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC25A1P53007 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC25A1P53007 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SLC25A1P53007 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC25A1P53007 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC25A1P53007 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC25A1P53007 NCF1C-201ENST00000438382 1427 ntBASIC15.09■□□□□ 0.01
SLC25A1P53007 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC25A1P53007 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.08■□□□□ 0.01
SLC25A1P53007 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
SLC25A1P53007 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.08■□□□□ 0.01
SLC25A1P53007 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.08■□□□□ 0.01
SLC25A1P53007 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC25A1P53007 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.08■□□□□ 0.01
SLC25A1P53007 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.08■□□□□ 0.01
SLC25A1P53007 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC25A1P53007 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
SLC25A1P53007 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SLC25A1P53007 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms