Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC080080.1-201ENST00000625121 2420 ntBASIC19.15■□□□□ 0.66
USP11P51784 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP11P51784 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.15■□□□□ 0.66
USP11P51784 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP11P51784 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP11P51784 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP11P51784 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP11P51784 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.15■□□□□ 0.66
USP11P51784 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP11P51784 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP11P51784 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
USP11P51784 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP11P51784 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.14■□□□□ 0.65
USP11P51784 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.14■□□□□ 0.65
USP11P51784 HMGA1P7-201ENST00000406908 502 ntBASIC19.14■□□□□ 0.65
USP11P51784 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.14■□□□□ 0.65
USP11P51784 MCCD1P2-201ENST00000423228 335 ntBASIC19.14■□□□□ 0.65
USP11P51784 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 AC074386.1-202ENST00000463561 864 ntBASIC19.14■□□□□ 0.65
USP11P51784 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.14■□□□□ 0.65
USP11P51784 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.14■□□□□ 0.65
USP11P51784 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.14■□□□□ 0.65
USP11P51784 AP001350.2-201ENST00000625104 1094 ntBASIC19.14■□□□□ 0.65
USP11P51784 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 AC105020.1-201ENST00000435356 2205 ntBASIC19.14■□□□□ 0.65
USP11P51784 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USP11P51784 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USP11P51784 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USP11P51784 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP11P51784 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
USP11P51784 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.13■□□□□ 0.65
USP11P51784 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.13■□□□□ 0.65
USP11P51784 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
USP11P51784 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.13■□□□□ 0.65
USP11P51784 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.13■□□□□ 0.65
USP11P51784 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
USP11P51784 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.13■□□□□ 0.65
USP11P51784 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.13■□□□□ 0.65
USP11P51784 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP11P51784 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.13■□□□□ 0.65
USP11P51784 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.13■□□□□ 0.65
USP11P51784 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP11P51784 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP11P51784 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.12■□□□□ 0.65
USP11P51784 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 AL645728.1-201ENST00000366221 2101 ntBASIC19.12■□□□□ 0.65
USP11P51784 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.12■□□□□ 0.65
USP11P51784 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.12■□□□□ 0.65
USP11P51784 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USP11P51784 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
USP11P51784 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP11P51784 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.12■□□□□ 0.65
USP11P51784 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
USP11P51784 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP11P51784 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.12■□□□□ 0.65
USP11P51784 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.12■□□□□ 0.65
USP11P51784 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.12■□□□□ 0.65
USP11P51784 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
USP11P51784 MTDHP5-201ENST00000598980 586 ntBASIC19.12■□□□□ 0.65
USP11P51784 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.12■□□□□ 0.65
USP11P51784 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.12■□□□□ 0.65
USP11P51784 PCDHA12-202ENST00000613593 2588 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms