Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CTCFP49711 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CTCFP49711 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.57■□□□□ 0.72
CTCFP49711 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.57■□□□□ 0.72
CTCFP49711 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.57■□□□□ 0.72
CTCFP49711 AL355994.2-201ENST00000447882 704 ntBASIC19.57■□□□□ 0.72
CTCFP49711 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.57■□□□□ 0.72
CTCFP49711 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.57■□□□□ 0.72
CTCFP49711 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.57■□□□□ 0.72
CTCFP49711 AC109635.5-201ENST00000533593 962 ntBASIC19.57■□□□□ 0.72
CTCFP49711 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.57■□□□□ 0.72
CTCFP49711 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.57■□□□□ 0.72
CTCFP49711 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.57■□□□□ 0.72
CTCFP49711 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CTCFP49711 TEX28P1-201ENST00000613479 1221 ntBASIC19.57■□□□□ 0.72
CTCFP49711 TEX28P2-201ENST00000617764 1221 ntBASIC19.57■□□□□ 0.72
CTCFP49711 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.57■□□□□ 0.72
CTCFP49711 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.57■□□□□ 0.72
CTCFP49711 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CTCFP49711 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.57■□□□□ 0.72
CTCFP49711 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CTCFP49711 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.57■□□□□ 0.72
CTCFP49711 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTCFP49711 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CTCFP49711 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CTCFP49711 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 TUBB1P2-201ENST00000422712 1306 ntBASIC19.56■□□□□ 0.72
CTCFP49711 TUBB1P1-201ENST00000503144 1300 ntBASIC19.56■□□□□ 0.72
CTCFP49711 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.56■□□□□ 0.72
CTCFP49711 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.56■□□□□ 0.72
CTCFP49711 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 ANKRD19P-201ENST00000338192 862 ntBASIC19.56■□□□□ 0.72
CTCFP49711 SPDYE19P-201ENST00000338590 713 ntBASIC19.56■□□□□ 0.72
CTCFP49711 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CTCFP49711 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CTCFP49711 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.56■□□□□ 0.72
CTCFP49711 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CTCFP49711 AC007389.4-201ENST00000454674 793 ntBASIC19.56■□□□□ 0.72
CTCFP49711 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.56■□□□□ 0.72
CTCFP49711 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.56■□□□□ 0.72
CTCFP49711 RARRES2P9-201ENST00000565168 469 ntBASIC19.56■□□□□ 0.72
CTCFP49711 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.56■□□□□ 0.72
CTCFP49711 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.56■□□□□ 0.72
CTCFP49711 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.56■□□□□ 0.72
CTCFP49711 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CTCFP49711 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTCFP49711 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 AC006538.1-201ENST00000567905 1585 ntBASIC19.56■□□□□ 0.72
CTCFP49711 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTCFP49711 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.56■□□□□ 0.72
CTCFP49711 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTCFP49711 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.56■□□□□ 0.72
CTCFP49711 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.56■□□□□ 0.72
CTCFP49711 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CTCFP49711 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CTCFP49711 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CTCFP49711 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTCFP49711 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CTCFP49711 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.55■□□□□ 0.72
CTCFP49711 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.55■□□□□ 0.72
CTCFP49711 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CTCFP49711 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms