Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.88■□□□□ 0.45
GRIK1P39086 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
GRIK1P39086 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.88■□□□□ 0.45
GRIK1P39086 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.88■□□□□ 0.45
GRIK1P39086 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
GRIK1P39086 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.88■□□□□ 0.45
GRIK1P39086 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.88■□□□□ 0.45
GRIK1P39086 FAM58CP-201ENST00000435741 640 ntBASIC17.88■□□□□ 0.45
GRIK1P39086 MKNK2P1-201ENST00000437526 628 ntBASIC17.88■□□□□ 0.45
GRIK1P39086 AC004967.1-201ENST00000453589 447 ntBASIC17.88■□□□□ 0.45
GRIK1P39086 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.88■□□□□ 0.45
GRIK1P39086 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.88■□□□□ 0.45
GRIK1P39086 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.88■□□□□ 0.45
GRIK1P39086 AL645728.2-201ENST00000641974 660 ntBASIC17.88■□□□□ 0.45
GRIK1P39086 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.88■□□□□ 0.45
GRIK1P39086 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.88■□□□□ 0.45
GRIK1P39086 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
GRIK1P39086 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 AC106820.2-201ENST00000563775 3264 ntBASIC17.88■□□□□ 0.45
GRIK1P39086 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.88■□□□□ 0.45
GRIK1P39086 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.88■□□□□ 0.45
GRIK1P39086 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GRIK1P39086 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.87■□□□□ 0.45
GRIK1P39086 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GRIK1P39086 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.87■□□□□ 0.45
GRIK1P39086 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GRIK1P39086 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GRIK1P39086 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.87■□□□□ 0.45
GRIK1P39086 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.87■□□□□ 0.45
GRIK1P39086 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
GRIK1P39086 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.87■□□□□ 0.45
GRIK1P39086 AL031432.2-201ENST00000566714 459 ntBASIC17.87■□□□□ 0.45
GRIK1P39086 AL928711.1-201ENST00000570165 459 ntBASIC17.87■□□□□ 0.45
GRIK1P39086 MIR4515-201ENST00000584082 81 ntBASIC17.87■□□□□ 0.45
GRIK1P39086 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.87■□□□□ 0.45
GRIK1P39086 AC091812.2-201ENST00000619081 385 ntBASIC17.87■□□□□ 0.45
GRIK1P39086 AC079781.4-201ENST00000641908 219 ntBASIC17.87■□□□□ 0.45
GRIK1P39086 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.87■□□□□ 0.45
GRIK1P39086 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.87■□□□□ 0.45
GRIK1P39086 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
GRIK1P39086 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 TOP3BP1-201ENST00000420768 1380 ntBASIC17.87■□□□□ 0.45
GRIK1P39086 AL021920.2-201ENST00000624828 1351 ntBASIC17.87■□□□□ 0.45
GRIK1P39086 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.87■□□□□ 0.45
GRIK1P39086 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
GRIK1P39086 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 AC092919.2-201ENST00000623631 1645 ntBASIC17.87■□□□□ 0.45
GRIK1P39086 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GRIK1P39086 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GRIK1P39086 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GRIK1P39086 AC139713.2-201ENST00000641328 2723 ntBASIC17.86■□□□□ 0.45
GRIK1P39086 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GRIK1P39086 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
GRIK1P39086 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.86■□□□□ 0.45
GRIK1P39086 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.86■□□□□ 0.45
GRIK1P39086 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GRIK1P39086 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GRIK1P39086 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GRIK1P39086 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.86■□□□□ 0.45
GRIK1P39086 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.86■□□□□ 0.45
GRIK1P39086 CEND1P1-201ENST00000451006 455 ntBASIC17.86■□□□□ 0.45
GRIK1P39086 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
GRIK1P39086 YBX1P5-201ENST00000509441 847 ntBASIC17.86■□□□□ 0.45
GRIK1P39086 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.86■□□□□ 0.45
GRIK1P39086 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms