Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNGA1P29973 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.33■□□□□ 0.68
CNGA1P29973 AL645728.2-201ENST00000641974 660 ntBASIC19.33■□□□□ 0.68
CNGA1P29973 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNGA1P29973 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.33■□□□□ 0.68
CNGA1P29973 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNGA1P29973 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.33■□□□□ 0.68
CNGA1P29973 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.33■□□□□ 0.68
CNGA1P29973 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNGA1P29973 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.33■□□□□ 0.68
CNGA1P29973 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNGA1P29973 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.33■□□□□ 0.68
CNGA1P29973 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CNGA1P29973 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CNGA1P29973 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.32■□□□□ 0.68
CNGA1P29973 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.32■□□□□ 0.68
CNGA1P29973 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.32■□□□□ 0.68
CNGA1P29973 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 RBPMS2P1-201ENST00000437762 623 ntBASIC19.32■□□□□ 0.68
CNGA1P29973 AC002472.2-201ENST00000442739 958 ntBASIC19.32■□□□□ 0.68
CNGA1P29973 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.32■□□□□ 0.68
CNGA1P29973 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.32■□□□□ 0.68
CNGA1P29973 AC243562.1-201ENST00000560672 389 ntBASIC19.32■□□□□ 0.68
CNGA1P29973 AL135744.1-201ENST00000565098 629 ntBASIC19.32■□□□□ 0.68
CNGA1P29973 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.32■□□□□ 0.68
CNGA1P29973 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.32■□□□□ 0.68
CNGA1P29973 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.32■□□□□ 0.68
CNGA1P29973 LINC00304-203ENST00000565008 1864 ntBASIC19.32■□□□□ 0.68
CNGA1P29973 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.32■□□□□ 0.68
CNGA1P29973 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNGA1P29973 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CNGA1P29973 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
CNGA1P29973 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CNGA1P29973 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CNGA1P29973 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.31■□□□□ 0.68
CNGA1P29973 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.31■□□□□ 0.68
CNGA1P29973 AC125807.1-201ENST00000483097 614 ntBASIC19.31■□□□□ 0.68
CNGA1P29973 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.31■□□□□ 0.68
CNGA1P29973 IGHV3-42-201ENST00000520410 361 ntBASIC19.31■□□□□ 0.68
CNGA1P29973 DUX4L17-201ENST00000557360 1267 ntBASIC19.31■□□□□ 0.68
CNGA1P29973 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.31■□□□□ 0.68
CNGA1P29973 AC051619.7-201ENST00000568314 623 ntBASIC19.31■□□□□ 0.68
CNGA1P29973 LINC01451-201ENST00000623792 534 ntBASIC19.31■□□□□ 0.68
CNGA1P29973 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CNGA1P29973 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.31■□□□□ 0.68
CNGA1P29973 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.31■□□□□ 0.68
CNGA1P29973 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.31■□□□□ 0.68
CNGA1P29973 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
CNGA1P29973 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CNGA1P29973 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNGA1P29973 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNGA1P29973 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.3■□□□□ 0.68
CNGA1P29973 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CNGA1P29973 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CNGA1P29973 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.3■□□□□ 0.68
CNGA1P29973 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNGA1P29973 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.3■□□□□ 0.68
CNGA1P29973 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.3■□□□□ 0.68
CNGA1P29973 AC107890.1-201ENST00000422478 521 ntBASIC19.3■□□□□ 0.68
CNGA1P29973 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.3■□□□□ 0.68
CNGA1P29973 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.3■□□□□ 0.68
CNGA1P29973 AC087641.1-201ENST00000557561 1021 ntBASIC19.3■□□□□ 0.68
CNGA1P29973 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.3■□□□□ 0.68
CNGA1P29973 RN7SL204P-201ENST00000582831 262 ntBASIC19.3■□□□□ 0.68
CNGA1P29973 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNGA1P29973 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNGA1P29973 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.3■□□□□ 0.68
CNGA1P29973 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.3■□□□□ 0.68
CNGA1P29973 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNGA1P29973 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.3■□□□□ 0.68
CNGA1P29973 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNGA1P29973 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CNGA1P29973 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.3■□□□□ 0.68
CNGA1P29973 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNGA1P29973 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.3■□□□□ 0.68
CNGA1P29973 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CNGA1P29973 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNGA1P29973 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
CNGA1P29973 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms