Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.63■□□□□ 0.09
SHC1P29353 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
SHC1P29353 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.63■□□□□ 0.09
SHC1P29353 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.63■□□□□ 0.09
SHC1P29353 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SHC1P29353 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.63■□□□□ 0.09
SHC1P29353 SLC25A6P4-201ENST00000586535 553 ntBASIC15.63■□□□□ 0.09
SHC1P29353 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.63■□□□□ 0.09
SHC1P29353 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.63■□□□□ 0.09
SHC1P29353 FLJ38576-201ENST00000623820 2459 ntBASIC15.63■□□□□ 0.09
SHC1P29353 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.63■□□□□ 0.09
SHC1P29353 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SHC1P29353 AC097637.2-201ENST00000624096 1997 ntBASIC15.63■□□□□ 0.09
SHC1P29353 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.63■□□□□ 0.09
SHC1P29353 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SHC1P29353 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.62■□□□□ 0.09
SHC1P29353 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.62■□□□□ 0.09
SHC1P29353 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.62■□□□□ 0.09
SHC1P29353 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
SHC1P29353 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.62■□□□□ 0.09
SHC1P29353 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
SHC1P29353 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.62■□□□□ 0.09
SHC1P29353 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SHC1P29353 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SHC1P29353 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SHC1P29353 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 SLC25A1P3-201ENST00000395415 828 ntBASIC15.62■□□□□ 0.09
SHC1P29353 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.62■□□□□ 0.09
SHC1P29353 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.62■□□□□ 0.09
SHC1P29353 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 KRT18P67-201ENST00000432816 1264 ntBASIC15.62■□□□□ 0.09
SHC1P29353 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.62■□□□□ 0.09
SHC1P29353 PRYP5-201ENST00000451909 266 ntBASIC15.62■□□□□ 0.09
SHC1P29353 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
SHC1P29353 AC073648.2-201ENST00000510116 352 ntBASIC15.62■□□□□ 0.09
SHC1P29353 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.62■□□□□ 0.09
SHC1P29353 AL049840.3-201ENST00000602669 611 ntBASIC15.62■□□□□ 0.09
SHC1P29353 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.62■□□□□ 0.09
SHC1P29353 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.62■□□□□ 0.09
SHC1P29353 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.62■□□□□ 0.09
SHC1P29353 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.62■□□□□ 0.09
SHC1P29353 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.62■□□□□ 0.09
SHC1P29353 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SHC1P29353 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.61■□□□□ 0.09
SHC1P29353 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SHC1P29353 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SHC1P29353 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SHC1P29353 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
SHC1P29353 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SHC1P29353 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SHC1P29353 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
SHC1P29353 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SHC1P29353 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.61■□□□□ 0.09
SHC1P29353 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.61■□□□□ 0.09
SHC1P29353 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.61■□□□□ 0.09
SHC1P29353 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SHC1P29353 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.61■□□□□ 0.09
SHC1P29353 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 RNA5SP419-201ENST00000515908 135 ntBASIC15.61■□□□□ 0.09
SHC1P29353 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SHC1P29353 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.61■□□□□ 0.09
SHC1P29353 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.61■□□□□ 0.09
SHC1P29353 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms