Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 RHOQP3-201ENST00000437982 621 ntBASIC18.66■□□□□ 0.58
ITGA4P13612 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.66■□□□□ 0.58
ITGA4P13612 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.66■□□□□ 0.58
ITGA4P13612 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.66■□□□□ 0.58
ITGA4P13612 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ITGA4P13612 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.66■□□□□ 0.58
ITGA4P13612 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ITGA4P13612 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.65■□□□□ 0.58
ITGA4P13612 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.65■□□□□ 0.58
ITGA4P13612 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.65■□□□□ 0.58
ITGA4P13612 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.65■□□□□ 0.58
ITGA4P13612 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ITGA4P13612 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.65■□□□□ 0.58
ITGA4P13612 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ITGA4P13612 AC211486.1-202ENST00000416371 468 ntBASIC18.65■□□□□ 0.58
ITGA4P13612 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.65■□□□□ 0.58
ITGA4P13612 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.65■□□□□ 0.58
ITGA4P13612 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.65■□□□□ 0.58
ITGA4P13612 CXCL1P1-201ENST00000502804 216 ntBASIC18.65■□□□□ 0.58
ITGA4P13612 AC211476.1-201ENST00000503899 468 ntBASIC18.65■□□□□ 0.58
ITGA4P13612 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.65■□□□□ 0.58
ITGA4P13612 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.65■□□□□ 0.58
ITGA4P13612 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
ITGA4P13612 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 AC007064.4-201ENST00000637740 555 ntBASIC18.65■□□□□ 0.58
ITGA4P13612 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.65■□□□□ 0.58
ITGA4P13612 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.65■□□□□ 0.58
ITGA4P13612 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ITGA4P13612 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
ITGA4P13612 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ITGA4P13612 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ITGA4P13612 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ITGA4P13612 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.64■□□□□ 0.57
ITGA4P13612 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ITGA4P13612 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ITGA4P13612 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ITGA4P13612 PAWRP1-201ENST00000451083 565 ntBASIC18.64■□□□□ 0.57
ITGA4P13612 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 ALG1L5P-201ENST00000482043 771 ntBASIC18.64■□□□□ 0.57
ITGA4P13612 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.64■□□□□ 0.57
ITGA4P13612 KRT19P2-202ENST00000557173 1012 ntBASIC18.64■□□□□ 0.57
ITGA4P13612 PDPK2P-202ENST00000562415 1191 ntBASIC18.64■□□□□ 0.57
ITGA4P13612 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
ITGA4P13612 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.64■□□□□ 0.57
ITGA4P13612 AP001160.2-201ENST00000596071 487 ntBASIC18.64■□□□□ 0.57
ITGA4P13612 AC023141.13-201ENST00000604991 943 ntBASIC18.64■□□□□ 0.57
ITGA4P13612 C20orf181-201ENST00000623918 480 ntBASIC18.64■□□□□ 0.57
ITGA4P13612 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ITGA4P13612 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITGA4P13612 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ITGA4P13612 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.64■□□□□ 0.57
ITGA4P13612 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.64■□□□□ 0.57
ITGA4P13612 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA4P13612 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA4P13612 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA4P13612 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITGA4P13612 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms