Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM2P07951 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.41■□□□□ 0.7
TPM2P07951 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.41■□□□□ 0.7
TPM2P07951 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM2P07951 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM2P07951 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.41■□□□□ 0.7
TPM2P07951 AC079602.3-201ENST00000623931 403 ntBASIC19.41■□□□□ 0.7
TPM2P07951 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.41■□□□□ 0.7
TPM2P07951 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM2P07951 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
TPM2P07951 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TPM2P07951 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM2P07951 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM2P07951 CICP13-201ENST00000422015 2789 ntBASIC19.41■□□□□ 0.7
TPM2P07951 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM2P07951 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM2P07951 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TPM2P07951 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TPM2P07951 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM2P07951 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TPM2P07951 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TPM2P07951 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 ZNF444P1-201ENST00000559497 298 ntBASIC19.4■□□□□ 0.7
TPM2P07951 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
TPM2P07951 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TPM2P07951 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM2P07951 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TPM2P07951 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM2P07951 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
TPM2P07951 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM2P07951 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM2P07951 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TPM2P07951 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPM2P07951 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
TPM2P07951 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TPM2P07951 AL009178.2-201ENST00000597278 2719 ntBASIC19.39■□□□□ 0.7
TPM2P07951 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.7
TPM2P07951 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TPM2P07951 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TPM2P07951 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TPM2P07951 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.39■□□□□ 0.69
TPM2P07951 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TPM2P07951 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TPM2P07951 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 STARP1-201ENST00000397973 869 ntBASIC19.39■□□□□ 0.69
TPM2P07951 AC087499.1-201ENST00000418141 1075 ntBASIC19.39■□□□□ 0.69
TPM2P07951 AP003733.1-201ENST00000491725 852 ntBASIC19.39■□□□□ 0.69
TPM2P07951 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.39■□□□□ 0.69
TPM2P07951 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TPM2P07951 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.39■□□□□ 0.69
TPM2P07951 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.39■□□□□ 0.69
TPM2P07951 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
TPM2P07951 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.39■□□□□ 0.69
TPM2P07951 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.39■□□□□ 0.69
TPM2P07951 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM2P07951 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms