Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.15■□□□□ 0.34
RETP07949 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RETP07949 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.15■□□□□ 0.34
RETP07949 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.15■□□□□ 0.34
RETP07949 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.15■□□□□ 0.34
RETP07949 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.15■□□□□ 0.34
RETP07949 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RETP07949 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.14■□□□□ 0.34
RETP07949 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.14■□□□□ 0.33
RETP07949 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RETP07949 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RETP07949 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.14■□□□□ 0.33
RETP07949 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.14■□□□□ 0.33
RETP07949 KRT8P48-201ENST00000515599 1220 ntBASIC17.14■□□□□ 0.33
RETP07949 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.14■□□□□ 0.33
RETP07949 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 AC109462.3-201ENST00000573934 613 ntBASIC17.14■□□□□ 0.33
RETP07949 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.14■□□□□ 0.33
RETP07949 MIR6752-201ENST00000618442 71 ntBASIC17.14■□□□□ 0.33
RETP07949 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.14■□□□□ 0.33
RETP07949 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RETP07949 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.14■□□□□ 0.33
RETP07949 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RETP07949 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RETP07949 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RETP07949 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RETP07949 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.14■□□□□ 0.33
RETP07949 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RETP07949 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
RETP07949 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
RETP07949 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.13■□□□□ 0.33
RETP07949 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
RETP07949 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.13■□□□□ 0.33
RETP07949 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
RETP07949 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RETP07949 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RETP07949 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RETP07949 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.13■□□□□ 0.33
RETP07949 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RETP07949 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.13■□□□□ 0.33
RETP07949 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.13■□□□□ 0.33
RETP07949 KRT18P32-201ENST00000424695 1287 ntBASIC17.13■□□□□ 0.33
RETP07949 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.13■□□□□ 0.33
RETP07949 DUTP2-201ENST00000519164 463 ntBASIC17.13■□□□□ 0.33
RETP07949 AP005018.1-201ENST00000525475 301 ntBASIC17.13■□□□□ 0.33
RETP07949 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.13■□□□□ 0.33
RETP07949 HTR7P1-202ENST00000624664 4411 ntBASIC17.13■□□□□ 0.33
RETP07949 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RETP07949 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RETP07949 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RETP07949 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RETP07949 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.12■□□□□ 0.33
RETP07949 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.12■□□□□ 0.33
RETP07949 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 PP12613-201ENST00000424958 2230 ntBASIC17.12■□□□□ 0.33
RETP07949 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RETP07949 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RETP07949 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RETP07949 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RETP07949 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.12■□□□□ 0.33
RETP07949 AL512638.1-201ENST00000457493 794 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms