Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.67□□□□□ -0.22
APOC3P02656 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC3P02656 AC022898.2-201ENST00000616822 1312 ntBASIC13.66□□□□□ -0.22
APOC3P02656 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
APOC3P02656 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
APOC3P02656 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC3P02656 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
APOC3P02656 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
APOC3P02656 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.66□□□□□ -0.22
APOC3P02656 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.66□□□□□ -0.22
APOC3P02656 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 AL390719.1-204ENST00000412397 1219 ntBASIC13.66□□□□□ -0.22
APOC3P02656 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.66□□□□□ -0.22
APOC3P02656 AL121832.2-201ENST00000610979 668 ntBASIC13.66□□□□□ -0.22
APOC3P02656 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.66□□□□□ -0.22
APOC3P02656 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC3P02656 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.66□□□□□ -0.22
APOC3P02656 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
APOC3P02656 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
APOC3P02656 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
APOC3P02656 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC3P02656 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC3P02656 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
APOC3P02656 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC3P02656 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
APOC3P02656 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC3P02656 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC3P02656 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 AC041040.2-201ENST00000622926 2899 ntBASIC13.65□□□□□ -0.22
APOC3P02656 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
APOC3P02656 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC3P02656 ME2P1-201ENST00000426028 1970 ntBASIC13.65□□□□□ -0.22
APOC3P02656 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 KRT8P41-201ENST00000533985 1514 ntBASIC13.65□□□□□ -0.22
APOC3P02656 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
APOC3P02656 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOC3P02656 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC3P02656 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC3P02656 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOC3P02656 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC3P02656 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.65□□□□□ -0.22
APOC3P02656 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.65□□□□□ -0.22
APOC3P02656 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 AL589743.5-201ENST00000616611 1050 ntBASIC13.65□□□□□ -0.22
APOC3P02656 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOC3P02656 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOC3P02656 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC3P02656 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC3P02656 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOC3P02656 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC3P02656 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC3P02656 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
APOC3P02656 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOC3P02656 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC3P02656 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
APOC3P02656 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
APOC3P02656 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 LINC01311-201ENST00000565162 1445 ntBASIC13.64□□□□□ -0.23
APOC3P02656 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
APOC3P02656 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC3P02656 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms