Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
NDUFS3O75489 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.97■□□□□ 0.31
NDUFS3O75489 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.97■□□□□ 0.31
NDUFS3O75489 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
NDUFS3O75489 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.97■□□□□ 0.31
NDUFS3O75489 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.97■□□□□ 0.31
NDUFS3O75489 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.97■□□□□ 0.31
NDUFS3O75489 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.97■□□□□ 0.31
NDUFS3O75489 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
NDUFS3O75489 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.97■□□□□ 0.31
NDUFS3O75489 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.97■□□□□ 0.31
NDUFS3O75489 AC021087.4-201ENST00000563761 564 ntBASIC16.97■□□□□ 0.31
NDUFS3O75489 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.97■□□□□ 0.31
NDUFS3O75489 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.97■□□□□ 0.31
NDUFS3O75489 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
NDUFS3O75489 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
NDUFS3O75489 AC243591.1-201ENST00000452967 1364 ntBASIC16.97■□□□□ 0.31
NDUFS3O75489 AL021920.2-201ENST00000624828 1351 ntBASIC16.97■□□□□ 0.31
NDUFS3O75489 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
NDUFS3O75489 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDUFS3O75489 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NDUFS3O75489 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.96■□□□□ 0.31
NDUFS3O75489 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.96■□□□□ 0.31
NDUFS3O75489 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.96■□□□□ 0.31
NDUFS3O75489 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NDUFS3O75489 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.96■□□□□ 0.31
NDUFS3O75489 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.96■□□□□ 0.31
NDUFS3O75489 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.96■□□□□ 0.31
NDUFS3O75489 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.96■□□□□ 0.31
NDUFS3O75489 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 AP002414.1-201ENST00000391405 1147 ntBASIC16.96■□□□□ 0.31
NDUFS3O75489 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NDUFS3O75489 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.96■□□□□ 0.31
NDUFS3O75489 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NDUFS3O75489 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.96■□□□□ 0.31
NDUFS3O75489 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.96■□□□□ 0.31
NDUFS3O75489 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NDUFS3O75489 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.96■□□□□ 0.31
NDUFS3O75489 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.96■□□□□ 0.31
NDUFS3O75489 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.96■□□□□ 0.31
NDUFS3O75489 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
NDUFS3O75489 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NDUFS3O75489 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
NDUFS3O75489 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NDUFS3O75489 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NDUFS3O75489 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NDUFS3O75489 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.96■□□□□ 0.3
NDUFS3O75489 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NDUFS3O75489 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.96■□□□□ 0.3
NDUFS3O75489 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NDUFS3O75489 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.96■□□□□ 0.3
NDUFS3O75489 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
NDUFS3O75489 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDUFS3O75489 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDUFS3O75489 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.95■□□□□ 0.3
NDUFS3O75489 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NDUFS3O75489 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.95■□□□□ 0.3
NDUFS3O75489 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NDUFS3O75489 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDUFS3O75489 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.95■□□□□ 0.3
NDUFS3O75489 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDUFS3O75489 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.95■□□□□ 0.3
NDUFS3O75489 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.95■□□□□ 0.3
NDUFS3O75489 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDUFS3O75489 AC025062.2-201ENST00000605477 670 ntBASIC16.95■□□□□ 0.3
NDUFS3O75489 AC004706.3-202ENST00000621574 984 ntBASIC16.95■□□□□ 0.3
NDUFS3O75489 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.95■□□□□ 0.3
NDUFS3O75489 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NDUFS3O75489 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.95■□□□□ 0.3
NDUFS3O75489 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NDUFS3O75489 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NDUFS3O75489 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NDUFS3O75489 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms