Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CPNE3O75131 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CPNE3O75131 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.38■□□□□ 0.21
CPNE3O75131 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.38■□□□□ 0.21
CPNE3O75131 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CPNE3O75131 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.38■□□□□ 0.21
CPNE3O75131 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CPNE3O75131 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE3O75131 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 PI4KAP1-204ENST00000612579 1703 ntBASIC16.37■□□□□ 0.21
CPNE3O75131 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPNE3O75131 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE3O75131 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE3O75131 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE3O75131 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE3O75131 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPNE3O75131 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE3O75131 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE3O75131 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE3O75131 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE3O75131 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 AC018845.2-201ENST00000568326 409 ntBASIC16.37■□□□□ 0.21
CPNE3O75131 AL139327.4-201ENST00000612362 153 ntBASIC16.37■□□□□ 0.21
CPNE3O75131 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE3O75131 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE3O75131 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE3O75131 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE3O75131 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CPNE3O75131 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CPNE3O75131 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE3O75131 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.36■□□□□ 0.21
CPNE3O75131 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE3O75131 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE3O75131 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CPNE3O75131 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CPNE3O75131 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE3O75131 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE3O75131 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 AL135999.2-201ENST00000622438 1686 ntBASIC16.36■□□□□ 0.21
CPNE3O75131 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE3O75131 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CPNE3O75131 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE3O75131 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CPNE3O75131 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE3O75131 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CPNE3O75131 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE3O75131 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE3O75131 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CPNE3O75131 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE3O75131 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms