Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUBNO60494 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.44□□□□□ -0.26
CUBNO60494 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUBNO60494 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.44□□□□□ -0.26
CUBNO60494 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CUBNO60494 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUBNO60494 RNA5SP423-201ENST00000517127 109 ntBASIC13.44□□□□□ -0.26
CUBNO60494 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.44□□□□□ -0.26
CUBNO60494 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUBNO60494 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUBNO60494 CDC14C-201ENST00000428251 1719 ntBASIC13.44□□□□□ -0.26
CUBNO60494 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.44□□□□□ -0.26
CUBNO60494 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUBNO60494 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CUBNO60494 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.44□□□□□ -0.26
CUBNO60494 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CUBNO60494 ELK1P1-201ENST00000485699 580 ntBASIC13.44□□□□□ -0.26
CUBNO60494 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.44□□□□□ -0.26
CUBNO60494 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CUBNO60494 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.44□□□□□ -0.26
CUBNO60494 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.44□□□□□ -0.26
CUBNO60494 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.43□□□□□ -0.26
CUBNO60494 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.43□□□□□ -0.26
CUBNO60494 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.43□□□□□ -0.26
CUBNO60494 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.43□□□□□ -0.26
CUBNO60494 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.43□□□□□ -0.26
CUBNO60494 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.43□□□□□ -0.26
CUBNO60494 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.43□□□□□ -0.26
CUBNO60494 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.43□□□□□ -0.26
CUBNO60494 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.43□□□□□ -0.26
CUBNO60494 AL031055.1-201ENST00000606362 631 ntBASIC13.43□□□□□ -0.26
CUBNO60494 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.43□□□□□ -0.26
CUBNO60494 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CUBNO60494 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.43□□□□□ -0.26
CUBNO60494 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.43□□□□□ -0.26
CUBNO60494 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.43□□□□□ -0.26
CUBNO60494 AC135586.1-201ENST00000539323 574 ntBASIC13.43□□□□□ -0.26
CUBNO60494 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.43□□□□□ -0.26
CUBNO60494 AC007967.4-201ENST00000614700 386 ntBASIC13.43□□□□□ -0.26
CUBNO60494 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.43□□□□□ -0.26
CUBNO60494 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.43□□□□□ -0.26
CUBNO60494 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.43□□□□□ -0.26
CUBNO60494 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.43□□□□□ -0.26
CUBNO60494 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CUBNO60494 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CUBNO60494 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.42□□□□□ -0.26
CUBNO60494 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.42□□□□□ -0.26
CUBNO60494 ZNF890P-202ENST00000530367 1156 ntBASIC13.42□□□□□ -0.26
CUBNO60494 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.42□□□□□ -0.26
CUBNO60494 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.42□□□□□ -0.26
CUBNO60494 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
CUBNO60494 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 KRT8P44-201ENST00000441609 1350 ntBASIC13.42□□□□□ -0.26
CUBNO60494 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CUBNO60494 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.42□□□□□ -0.26
CUBNO60494 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.42□□□□□ -0.26
CUBNO60494 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.42□□□□□ -0.26
CUBNO60494 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.42□□□□□ -0.26
CUBNO60494 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.42□□□□□ -0.26
CUBNO60494 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CUBNO60494 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CUBNO60494 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.42□□□□□ -0.26
CUBNO60494 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.42□□□□□ -0.26
CUBNO60494 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.42□□□□□ -0.26
CUBNO60494 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.42□□□□□ -0.26
CUBNO60494 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms