Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.1■□□□□ 0.01
SGCEO43556 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SGCEO43556 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SGCEO43556 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.1■□□□□ 0.01
SGCEO43556 TSPY19P-201ENST00000418461 509 ntBASIC15.1■□□□□ 0.01
SGCEO43556 TSPY18P-201ENST00000441642 509 ntBASIC15.1■□□□□ 0.01
SGCEO43556 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.1■□□□□ 0.01
SGCEO43556 AC106795.1-205ENST00000512851 1056 ntBASIC15.1■□□□□ 0.01
SGCEO43556 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.1■□□□□ 0.01
SGCEO43556 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SGCEO43556 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SGCEO43556 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.1■□□□□ 0.01
SGCEO43556 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SGCEO43556 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SGCEO43556 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SGCEO43556 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SGCEO43556 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.09■□□□□ 0.01
SGCEO43556 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
SGCEO43556 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.09■□□□□ 0.01
SGCEO43556 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SGCEO43556 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.09■□□□□ 0.01
SGCEO43556 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.09■□□□□ 0.01
SGCEO43556 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SGCEO43556 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
SGCEO43556 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.09■□□□□ 0.01
SGCEO43556 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SGCEO43556 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.09■□□□□ 0.01
SGCEO43556 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.09■□□□□ 0.01
SGCEO43556 ACTG1P4-201ENST00000425123 1122 ntBASIC15.09■□□□□ 0.01
SGCEO43556 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.09■□□□□ 0.01
SGCEO43556 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.09■□□□□ 0.01
SGCEO43556 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.09■□□□□ 0.01
SGCEO43556 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 AD000864.1-201ENST00000624076 2295 ntBASIC15.09■□□□□ 0.01
SGCEO43556 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 AC097637.2-201ENST00000624096 1997 ntBASIC15.09■□□□□ 0.01
SGCEO43556 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
SGCEO43556 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 AC060834.1-201ENST00000443027 2032 ntBASIC15.09■□□□□ 0.01
SGCEO43556 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.09■□□□□ 0.01
SGCEO43556 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SGCEO43556 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SGCEO43556 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SGCEO43556 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SGCEO43556 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.08■□□□□ 0.01
SGCEO43556 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SGCEO43556 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
SGCEO43556 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SGCEO43556 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
SGCEO43556 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
SGCEO43556 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 AL118508.1-201ENST00000613502 2345 ntBASIC15.08■□□□□ 0
SGCEO43556 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.08■□□□□ 0
SGCEO43556 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.08■□□□□ 0
SGCEO43556 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.08■□□□□ 0
SGCEO43556 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.08■□□□□ 0
SGCEO43556 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SGCEO43556 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms