Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC188H7C350 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC188H7C350 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC188H7C350 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC188H7C350 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC188H7C350 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC188H7C350 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC188H7C350 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
CCDC188H7C350 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.71■□□□□ 0.42
CCDC188H7C350 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC188H7C350 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC188H7C350 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC188H7C350 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC188H7C350 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCDC188H7C350 ACTG1P4-201ENST00000425123 1122 ntBASIC17.7■□□□□ 0.42
CCDC188H7C350 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC188H7C350 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC188H7C350 SPDYE13P-201ENST00000445314 798 ntBASIC17.7■□□□□ 0.42
CCDC188H7C350 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC188H7C350 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.7■□□□□ 0.42
CCDC188H7C350 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC188H7C350 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC188H7C350 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC188H7C350 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC188H7C350 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC188H7C350 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC188H7C350 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC188H7C350 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC188H7C350 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 TERF1P1-201ENST00000311003 1181 ntBASIC17.69■□□□□ 0.42
CCDC188H7C350 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC188H7C350 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC188H7C350 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 AC090616.6-201ENST00000582640 721 ntBASIC17.69■□□□□ 0.42
CCDC188H7C350 AC073592.5-201ENST00000624854 528 ntBASIC17.69■□□□□ 0.42
CCDC188H7C350 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 AC132872.4-202ENST00000622924 2756 ntBASIC17.69■□□□□ 0.42
CCDC188H7C350 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC188H7C350 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC188H7C350 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC188H7C350 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC188H7C350 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC188H7C350 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC188H7C350 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC188H7C350 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC188H7C350 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC188H7C350 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC188H7C350 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC188H7C350 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC188H7C350 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC188H7C350 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC188H7C350 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC188H7C350 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC188H7C350 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC188H7C350 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms