Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 AL391256.1-201ENST00000443260 1855 ntBASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 AC144831.1-201ENST00000573312 2656 ntBASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 AC023824.1-201ENST00000562945 2975 ntBASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 AC034232.1-201ENST00000506026 1064 ntBASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 AL355075.4-201ENST00000554988 638 ntBASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
MEIS3P1A6NDR6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 AC096633.1-201ENST00000422446 749 ntBASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 IGHV3-52-201ENST00000519770 353 ntBASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 AC092850.2-201ENST00000623821 2697 ntBASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
MEIS3P1A6NDR6 AC005052.1-201ENST00000625181 2492 ntBASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MEIS3P1A6NDR6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms