Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 AC140658.5-201ENST00000438532 169 ntBASIC19.56■□□□□ 0.72
PALM3A6NDB9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.56■□□□□ 0.72
PALM3A6NDB9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.56■□□□□ 0.72
PALM3A6NDB9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.56■□□□□ 0.72
PALM3A6NDB9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PALM3A6NDB9 AC087641.1-201ENST00000557561 1021 ntBASIC19.56■□□□□ 0.72
PALM3A6NDB9 AC068137.2-201ENST00000605408 478 ntBASIC19.56■□□□□ 0.72
PALM3A6NDB9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.56■□□□□ 0.72
PALM3A6NDB9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PALM3A6NDB9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PALM3A6NDB9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PALM3A6NDB9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PALM3A6NDB9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PALM3A6NDB9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.56■□□□□ 0.72
PALM3A6NDB9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.56■□□□□ 0.72
PALM3A6NDB9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PALM3A6NDB9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PALM3A6NDB9 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PALM3A6NDB9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.56■□□□□ 0.72
PALM3A6NDB9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 AC006277.1-201ENST00000624348 1610 ntBASIC19.55■□□□□ 0.72
PALM3A6NDB9 LINC00895-201ENST00000629028 1637 ntBASIC19.55■□□□□ 0.72
PALM3A6NDB9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PALM3A6NDB9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PALM3A6NDB9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.55■□□□□ 0.72
PALM3A6NDB9 ALG1L5P-201ENST00000482043 771 ntBASIC19.55■□□□□ 0.72
PALM3A6NDB9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.55■□□□□ 0.72
PALM3A6NDB9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.55■□□□□ 0.72
PALM3A6NDB9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.55■□□□□ 0.72
PALM3A6NDB9 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.55■□□□□ 0.72
PALM3A6NDB9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.55■□□□□ 0.72
PALM3A6NDB9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.55■□□□□ 0.72
PALM3A6NDB9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 AL645728.1-201ENST00000366221 2101 ntBASIC19.55■□□□□ 0.72
PALM3A6NDB9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.55■□□□□ 0.72
PALM3A6NDB9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 AC012313.1-201ENST00000593393 3059 ntBASIC19.55■□□□□ 0.72
PALM3A6NDB9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PALM3A6NDB9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 CYP2A7P1-201ENST00000595391 815 ntBASIC19.54■□□□□ 0.72
PALM3A6NDB9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 AC080080.1-201ENST00000625121 2420 ntBASIC19.54■□□□□ 0.72
PALM3A6NDB9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.54■□□□□ 0.72
PALM3A6NDB9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PALM3A6NDB9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 MKNK2P1-201ENST00000437526 628 ntBASIC19.53■□□□□ 0.72
PALM3A6NDB9 YBX1P5-201ENST00000509441 847 ntBASIC19.53■□□□□ 0.72
PALM3A6NDB9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 AC055717.3-201ENST00000622967 595 ntBASIC19.53■□□□□ 0.72
PALM3A6NDB9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms