Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TCRBV7S3A2A0A539 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.3■□□□□ 0.36
TCRBV7S3A2A0A539 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TCRBV7S3A2A0A539 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 AC046158.3-201ENST00000624947 2558 ntBASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 AC010331.1-201ENST00000611423 582 ntBASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 CYP2T1P-202ENST00000641596 2535 ntBASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 PKD1P1-201ENST00000458669 6805 ntBASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TCRBV7S3A2A0A539 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 FOSL1P1-201ENST00000511041 816 ntBASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 AP002490.2-201ENST00000524791 560 ntBASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 AL732292.2-201ENST00000609649 430 ntBASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 LINC00895-201ENST00000629028 1637 ntBASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TCRBV7S3A2A0A539 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TCRBV7S3A2A0A539 KRT16P4-201ENST00000453883 522 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms