Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC006449.5-201ENST00000610658 2098 ntBASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 RN7SL606P-201ENST00000472779 293 ntBASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC116353.5-201ENST00000638148 1699 ntBASIC16.46■□□□□ 0.23
RNF103-CHMP3A0A140T963 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RNF103-CHMP3A0A140T963 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
RNF103-CHMP3A0A140T963 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
RNF103-CHMP3A0A140T963 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.46■□□□□ 0.22
RNF103-CHMP3A0A140T963 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.46■□□□□ 0.22
RNF103-CHMP3A0A140T963 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.46■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC126755.1-201ENST00000525846 6405 ntBASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 LINC00554-201ENST00000564841 3011 ntBASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 IGHV3-52-201ENST00000519770 353 ntBASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC090616.6-201ENST00000582640 721 ntBASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 IGHV3-41-201ENST00000613121 348 ntBASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF103-CHMP3A0A140T963 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC132872.4-202ENST00000622924 2756 ntBASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms