Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 TSPY22P-201ENST00000427496 604 ntBASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 RNF126P1-202ENST00000569893 925 ntBASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 AL390719.2-201ENST00000606993 987 ntBASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 Z83836.1-201ENST00000624605 1642 ntBASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP4B1Q9Y6B7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
AP4B1Q9Y6B7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
AP4B1Q9Y6B7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
AP4B1Q9Y6B7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
AP4B1Q9Y6B7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 LINC02012-201ENST00000608206 1725 ntBASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 AC116407.2-201ENST00000613639 860 ntBASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP4B1Q9Y6B7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms