Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB2Q9Y5E7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB2Q9Y5E7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB2Q9Y5E7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHB2Q9Y5E7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB2Q9Y5E7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PCDHB2Q9Y5E7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB2Q9Y5E7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHB2Q9Y5E7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHB2Q9Y5E7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB2Q9Y5E7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 AC068137.2-201ENST00000605408 478 ntBASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 AC012313.1-201ENST00000593393 3059 ntBASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB2Q9Y5E7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 ACTG1P14-201ENST00000446382 1122 ntBASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 AC093525.9-201ENST00000624961 1746 ntBASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB2Q9Y5E7 AC092919.2-201ENST00000623631 1645 ntBASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 SLC25A1P3-201ENST00000395415 828 ntBASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 CNN2P11-201ENST00000429351 262 ntBASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 AC107918.2-201ENST00000530817 355 ntBASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 AP002472.1-201ENST00000577490 586 ntBASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 AC092902.6-201ENST00000641783 218 ntBASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 AC080080.1-201ENST00000625121 2420 ntBASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB2Q9Y5E7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms