Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 AC004263.2-201ENST00000617183 678 ntBASIC16.14■□□□□ 0.17
AP4S1Q9Y587 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AP4S1Q9Y587 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.12■□□□□ 0.17
AP4S1Q9Y587 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 AC099063.4-201ENST00000641099 1602 ntBASIC16.12■□□□□ 0.17
AP4S1Q9Y587 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 ABHD17AP1-201ENST00000358206 933 ntBASIC16.12■□□□□ 0.17
AP4S1Q9Y587 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 NEK4P2-201ENST00000580004 1012 ntBASIC16.12■□□□□ 0.17
AP4S1Q9Y587 AL359736.2-201ENST00000621992 437 ntBASIC16.12■□□□□ 0.17
AP4S1Q9Y587 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 NORAD-201ENST00000565493 5339 ntBASIC16.12■□□□□ 0.17
AP4S1Q9Y587 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP4S1Q9Y587 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms