Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 LINC01225-203ENST00000563550 1244 ntBASIC23.11■■□□□ 1.29
NINLQ9Y2I6 MIR4745-201ENST00000577608 62 ntBASIC23.11■■□□□ 1.29
NINLQ9Y2I6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 SLC9A3P2-201ENST00000447821 2021 ntBASIC23.1■■□□□ 1.29
NINLQ9Y2I6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 KRT18P32-201ENST00000424695 1287 ntBASIC23.1■■□□□ 1.29
NINLQ9Y2I6 AL592309.1-201ENST00000443127 649 ntBASIC23.1■■□□□ 1.29
NINLQ9Y2I6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NINLQ9Y2I6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 CD99-202ENST00000381180 530 ntTSL 2 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 GPS2P2-201ENST00000430745 888 ntBASIC23.09■■□□□ 1.29
NINLQ9Y2I6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
NINLQ9Y2I6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 AC109322.1-201ENST00000524499 1264 ntBASIC23.08■■□□□ 1.29
NINLQ9Y2I6 AL512356.2-201ENST00000546955 174 ntBASIC23.08■■□□□ 1.29
NINLQ9Y2I6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NINLQ9Y2I6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NINLQ9Y2I6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.28
NINLQ9Y2I6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NINLQ9Y2I6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NINLQ9Y2I6 PP12613-201ENST00000424958 2230 ntBASIC23.08■■□□□ 1.28
NINLQ9Y2I6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
NINLQ9Y2I6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
NINLQ9Y2I6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
NINLQ9Y2I6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
NINLQ9Y2I6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC23.07■■□□□ 1.28
NINLQ9Y2I6 AC016027.1-202ENST00000607927 1699 ntBASIC23.07■■□□□ 1.28
NINLQ9Y2I6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC23.07■■□□□ 1.28
NINLQ9Y2I6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NINLQ9Y2I6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
NINLQ9Y2I6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NINLQ9Y2I6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC23.07■■□□□ 1.28
NINLQ9Y2I6 AC015922.1-201ENST00000421102 1152 ntBASIC23.07■■□□□ 1.28
NINLQ9Y2I6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC23.07■■□□□ 1.28
NINLQ9Y2I6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NINLQ9Y2I6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NINLQ9Y2I6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms