Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AL096828.3-201ENST00000615354 462 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC024681.1-201ENST00000521917 487 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PMEL-214ENST00000550447 901 ntTSL 3 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 FAM220BP-201ENST00000377689 816 ntBASIC6.82□□□□□ -1.32
MACF1Q9UPN3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 NKAIN1P1-201ENST00000435754 582 ntBASIC6.82□□□□□ -1.32
MACF1Q9UPN3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 C1QBPP1-201ENST00000400117 770 ntBASIC6.82□□□□□ -1.32
MACF1Q9UPN3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 AC023310.1-201ENST00000554836 735 ntBASIC6.82□□□□□ -1.32
MACF1Q9UPN3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
MACF1Q9UPN3 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
MACF1Q9UPN3 AC007274.2-201ENST00000421675 662 ntBASIC6.81□□□□□ -1.32
MACF1Q9UPN3 AL355864.2-201ENST00000447420 863 ntBASIC6.81□□□□□ -1.32
MACF1Q9UPN3 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC6.81□□□□□ -1.32
MACF1Q9UPN3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC6.81□□□□□ -1.32
MACF1Q9UPN3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
MACF1Q9UPN3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC6.81□□□□□ -1.32
MACF1Q9UPN3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MACF1Q9UPN3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms