Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 AL391005.1-201ENST00000623953 2435 ntBASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PARPBPQ9NWS1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 KRT18P27-201ENST00000427733 1299 ntBASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 AL356488.2-201ENST00000602755 427 ntBASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 GGTLC5P-201ENST00000617623 998 ntBASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 AC007326.2-201ENST00000624224 7579 ntBASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 AC046158.3-201ENST00000624947 2558 ntBASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PARPBPQ9NWS1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 AL590787.1-201ENST00000568856 1315 ntBASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 AP002414.1-201ENST00000391405 1147 ntBASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 AC079776.4-201ENST00000511039 504 ntBASIC15.25■□□□□ 0.03
PARPBPQ9NWS1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms